BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C05SP1|AL424931
(1005 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig799 1527 0.0
>3x_Contig799
Length = 3669
Score = 1527 bits (768), Expect = 0.0
Identities = 774/778 (99%)
Strand = Plus / Minus
Query: 1 gatcacaaaaatattgtataccagttaccaccagattgcaccccactcattgttgcgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gatcacaaaaatattgtataccagttaccaccagattgcaccccactcattgttgcgaat 723
Query: 61 caatgtattgaggtactccagtttatgattgattctgatgctcgattgagatactttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 caatgtattgaggtactccagtttatgattgattctgatgctcgattgagatactttttc 663
Query: 121 gtcacagaacatgataacctcatcattaacaaaccatacgtcaagaccaaaaaggacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gtcacagaacatgataacctcatcattaacaaaccatacgtcaagaccaaaaaggacatt 603
Query: 181 ttttcgaaaaacatgaagtggccaatcaacgctttgttctccttatttaaccagaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttttcgaaaaacatgaagtggccaatcaacgctttgttctccttatttaaccagaaattg 543
Query: 241 gtgactgacgagactgttttaatggatctgttaacggatattttggagtcatgttccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtgactgacgagactgttttaatggatctgttaacggatattttggagtcatgttccaaa 483
Query: 301 cctattacgtcgttggttaaaaagaagaatgcmagcmactccaaaagaaattttgagatt 360
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 482 cctattacgtcgttggttaaaaagaagaatgcaagcaactccaaaagaaattttgagatt 423
Query: 361 cctgtgattgagaagaagcatttggaactaatcgtttcagtgatcaaattggattcgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctgtgattgagaagaagcatttggaactaatcgtttcagtgatcaaattggattcgtgc 363
Query: 421 aatacgaaaattttcaagcagaccttgaacctaatgaccaaccttttctccataaaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatacgaaaattttcaagcagaccttgaacctaatgaccaaccttttctccataaaggat 303
Query: 481 actcaggagatcttcacttcggagttgagaacgttggcaatgtctacgatttcccagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 actcaggagatcttcacttcggagttgagaacgttggcaatgtctacgatttcccagttg 243
Query: 541 atagcagatttgaatgaattgtgtttgcmattgcctaatgtgaagagcggaacagaaatc 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 242 atagcagatttgaatgaattgtgtttgcaattgcctaatgtgaagagcggaacagaaatc 183
Query: 601 aactcagaaatcattcaaaaattcactgctcccagctctgagcagtccaagttattaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aactcagaaatcattcaaaaattcactgctcccagctctgagcagtccaagttattaaag 123
Query: 661 gttgtyactgctgttgattatatctattctcatcaaaaggaaggagataccgaaagttca 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gttgtaactgctgttgattatatctattctcatcaaaaggaaggagataccgaaagttca 63
Query: 721 cgcaagttagttgcattgtttaacgaaatgaaactcggtgctgtctgggttgcgttaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgcaagttagttgcattgtttaacgaaatgaaactcggtgctgtctgggttgcgttaa 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8103
Number of Sequences: 1807
Number of extensions: 8103
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)